Maize Physical Mapping

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Maize status table

The New column shows the number of new clones. The Diff column shows the drop in contigs. Though the markers join some contigs, their role is mainly confirmation, anchoring, and information. Note that we are tapering off on the decrease of contigs, though we are increasing the number of large contigs. Also, the number of singletons is increasing; this is a phenomenom that was also seen with the human genome map.
Contig Sizes
Date Clone New Cov Marker New Anchor Contig Diff Single >200 200:100 100:51 50:26 25:10 9:3 =2
7/26/01 83096 - 4x 2078 - - 13150 - 9361 0 0 3 43 1359 8793 2953
8/31/01 97949 14853 5x 2078 0 - 13261 +111 8685 0 0 4 127 2238 8385 2507
10/24/01 135706 37757 7x 3045 967 77 12103 -1158 7866 0 3 80 764 3699 5970 1587
12/04/01 156506 20800 8x 3045 0 77 10580 -1523 7422 1 19 247 1252 3563 4278 1228
12/23/01 164701 8195 8x 7760 4715 133 9462 -1118 7437 0 25 423 1488 3133 3357 1036
1/23/02 176440 11739 9x 7909 149 135 8422 -1040 7497 0 62 628 1581 2690 2580 881
2/20/02 191962 15522 9x 7974 65 135 7315 -1107 7730 0 165 880 1509 2093 1934 734
3/25/02 203765 11803 10x 7978 4 135 6693 -622 8478 16 248 996 1409 1763 1622 670
5/3/02 215415 11650 11x 8815 837 188 6054 -623 9530 33 360 1004 1237 1442 1323 660
6/27/02 232862 17447 12x 10149 1334 405 5318 -736 10786 89 484 982 1050 1081 999 633
8/8/02 250065 17203 13x 10191 42 407 4847 -441 11191 151 572 951 911 805 826 631
9/30/02 256042 5977 13x 10950 759 681 4733 -114 11360 165 608 934 859 733 788 646
11/11/02 272346 16304 14x 14676 3726 791 4580 -153 12850 203 676 913 726 666 707 689


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