Tomato FPC Map |
Tomato fingerprints
We are collaborating with Dr. Steve Tanksley, Dr. Jim Giovannoni, and Dr. Greg Martin to build a sequence ready map of tomato. This is funded by NSF #0116076, "Exploitation of Tomato as a Model for Comparative and Functional Genomics". More information is provided by the Solanaceae Genomics Network database.
| Contig Sizes | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Clone | Cov | Marker | Anchor | Contig | Single | >200 | 200:101 | 100:51 | 50:26 | 25:10 | 9:3 | =2 | >5Q |
| 88680 | 10x | 644 | 263 | 4385 | 22945 | 0 | 7 | 185 | 616 | 1339 | 1623 | 614 | 1 |
Latest release is May 6 2004.
| WebFPC | Java display of the Tomato FPC contigs |
| WebChrom | view tomato chromosomes |
| WebBSS | compare your sequence to the BES and sequenced clones |
| WebFcmp | compare fingerprints |
| FTP | a tar file the FPC files. Download FPC V7.2. |
Email comments to
webmaster@genome.arizona.edu