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How to identify an address:
4 x 4 THREE Field Picture
Diagram
The membrane is divided into 3 fields (click above link for diagram).
Each field contains 384 squares. The 384 squares represent the row
and column identification of the BAC. Within each square there are
16 positions where 8 clones are spotted in duplicate (see diagram).
The pattern of the spotted clones will generate the plate address
of the BAC. To identify your clone, please follow the directions
below.
The most complicated part about identifying a clone address is
that consecutive plates are not spotted into each field. The 384
well plates are spotted onto the membrane with plates 1-3 spotted
into fields 1-3 respectively (duplication pattern 1, see diagram).
Since there is a total of 3 fields on the membrane, the cycle will
continue with the next three consecutive plates (plates 4 through
6) again being spotted into fields 1 through 3 respectively, but
in a different duplication pattern (duplication pattern 2, see diagram).
This gridding cycle will continue until all the plates have been
spotted.
1. The library name and filter number is used to orient the membrane.
Place the membrane with the label facing up and on the right-hand
side as shown in the diagram. (The colonies are on the same side
of the filter as the label)
2. Identify the field number of the hybridizing colonies. The spacing
of colonies is slightly wider between the fields.
3. Identify the well location (I have included a grid to help and
identify the well position (e.g. L18)
4. Identify the plate number. This is accomplished by determining
the orientation of the duplicate spots (duplication pattern in the
diagram) and referring to the table inside each field in the figure.
Example: If you have horizontal spots, they could either be duplication
position 4 or 8 (from the duplication pattern). They are distinguished
by the closeness of the spots and position in the pattern. Assume
it is position 4 in field 3. Read down the table in field 3 of the
diagram to pos4 and read the plate number as 12. The library plate
number is 12. Once the plate number is determined, identify the
well location either by using the library plate grid (see link for
this) or counting the rows and columns.
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