Healthy People
Project
Note: 1) Library names with hyperlinks, indicate
whole libraries (or individual clones) are available for public
distribution. 2) Please click on hyperlinked library name in
order to purchase this library from the Orders site.
Genus |
Species |
Library / Orders |
Common Name |
Genome Size (Mb) |
Avg Insert Size (Kb) |
No. of Clones |
Hyb. FingerPrinting(FP) &
Sequencing(Seq) QC |
Distributed by |
Status* |
Comments |
Tachyglossus |
aculeatus |
TA__Ba |
echidna |
3000 |
145 |
210048 |
Seq
|
AGI |
5 |
- |
Ginglymostoma |
cirratum |
GC__Ba |
shark |
4000 |
130 |
313344 |
Seq
| FP |
AGI |
7 |
- |
Macropus |
eugenii |
ME_KBa |
wallaby |
3500 |
166 |
239616 |
Seq
| FP |
AGI |
7 |
- |
Biomphalaria |
glabrata |
BG_BBa |
snail |
931 |
144 |
61824 |
Seq
| FP |
AGI |
7 |
The D filter will contain plates
145-161 and plates 1-31 again to fill the filter at 48
plates. |
Taeniopygia |
guttata |
TG__Ba |
zebra finch |
1900 |
134 |
147456 |
Seq
| FP |
AGI |
7 |
- |
Rattus |
norveigicus |
RN__Ba |
rat |
3000 |
160 |
202752 |
Seq
|
AGI |
5 |
Rat strain CDL ( F344) from Charles
River Laboratories. |
Ornithorhynchus |
anatinus |
OA__Bb |
Duck-billed Platypus |
3000 |
143 |
230400 |
FP |
CUGI |
N/A |
- |
Sorex |
araneus |
SA__Ba |
European Common Shrew |
3000 |
140 |
239616 |
FP |
CUGI |
N/A |
- |
Crassotrea |
gigas |
CG__Ba |
Pacific Oyster |
900 |
150 |
73728 |
- |
CUGI |
N/A |
- |
Papilio |
glaucus |
PG__Ba |
ETS Butterfly |
440 |
135 |
36864 |
- |
CUGI |
N/A |
- |
Saccoglossus |
kowalevskii |
SK__Ba |
Acorn Worm |
1000 |
130 |
110592 |
- |
CUGI |
N/A |
- |
Mus |
Musculus |
MM_DBa |
Mouse |
3000 |
143 |
215040 |
- |
CUGI |
N/A |
- |
Ostrinia |
nubilalis |
ON__Ba |
European Corn Borer |
500 |
130 |
36864 |
- |
CUGI |
N/A |
- |
Heliothis |
subflexa |
HS__Ba |
Noctuid Moth |
500 |
131 |
36864 |
- |
CUGI |
N/A |
- |
Crassotrea |
virginica |
CV__Ba |
Eastern Oyster |
700 |
134 |
55296 |
- |
CUGI |
N/A |
- |
Solenopsis |
wagneri |
SW__Ba |
Fire Ant |
800 |
132 |
73728 |
- |
CUGI |
N/A |
- |
Thermobia |
domestica |
TD__Ba |
Firebrat |
5526 |
145 |
258048 |
Seq
|
AGI |
5 |
- | |
* 1 - None, 2 - HMW DNA
Prepared, 3 - Clones Picked, 4 - QC Sizing Done, 5 -
QC Seq Done, 6 - QC FP Done, 7 - Completed.
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Drosophila
Note: 1) Library names with hyperlinks, indicate
whole libraries (or individual clones) are available for public
distribution. 2) Please click on hyperlinked library name in
order to purchase this library from the Orders site.
Genus |
Species |
Library / Orders |
Common Name |
Genome Size (Mb) |
Avg Insert Size (Kb) |
No. of Clones |
Hyb. FingerPrinting(FP) &
Sequencing(Seq) QC |
Distributed by |
Status* |
Comments |
Drosophila |
albomicans |
DA_BBa |
fruit fly |
193 |
146 |
18432 |
Seq
|
AGI |
7 |
TSC# 15112-1751.08 |
Drosophila |
americana |
DA_ABa |
fruit fly |
145 |
130 |
11520 |
Seq
|
AGI |
7 |
TSC #15010-0951.15. Filter A will
contain plates 1-30 and plates 1-18 again to fill the filter
at 48 plates. |
Drosophila |
ananassae |
DA__Ba |
fruit fly |
376 |
150 |
36864 |
Seq
| FP |
AGI |
7 |
TSC # 14024-0371.13. Stock center line
AAbbg1. Drosophila line AAbbg1 from Muneo Matsuda. Cloned into
BamHI. |
Drosophila |
arizonae |
DA_CBa |
fruit fly |
212 |
132 |
18432 |
Seq
|
AGI |
7 |
TSC# 15081-1271.27 |
Drosophila |
busckii |
DB__Ba |
fruit fly |
181 |
160 |
18432 |
Seq |
AGI |
7 |
TSC# 13000-0081.31 |
Drosophila |
erecta |
DE_TBa |
fruit fly |
152 |
152 |
18432 |
Seq
|
AGI |
7 |
TSC line#14021-0224.01 |
Drosophila |
grimshawi |
DG__Ba |
fruit fly |
240 |
135 |
18432 |
Seq
|
AGI |
7 |
TSC# 15287-2541.00 |
Drosophila |
hydei |
DH__Ba |
fruit fly |
391 |
150 |
36864 |
Seq
|
AGI |
7 |
TSC# 15085-1641.58 |
Drosophila |
littoralis |
DL__Ba |
fruit fly |
362 |
160 |
36864 |
Seq
|
AGI |
7 |
TSC# 15010-1001.11 |
Drosophila |
mercatorum |
DM__Ba |
fruit fly |
169 |
150 |
18432 |
Seq
|
AGI |
7 |
TSC #15082-1521.36 |
Drosophila |
mojavensis |
DM_CBa |
fruit fly |
376 |
140 |
30720 |
Seq
|
AGI |
7 |
TSC # 15081-1352.22. Stock center line
CI-12 IB4. Cloned into BamHI. Filter B will contain plates
49-80 and plates 1-16 again to fill the filter at 48
plates. |
Drosophila |
novamexicana |
DN__Ba |
fruit fly |
155 |
160 |
13440 |
Seq
|
AGI |
7 |
TSC# 15010-1031.14 |
Drosophila |
persimilis |
DP__Ba |
fruit fly |
176 |
150 |
18432 |
Seq
|
AGI |
7 |
TSC# 14011-0111.49 |
Drosophila |
repleta |
DR__Ba |
fruit fly |
376 |
130 |
36864 |
Seq
|
AGI |
7 |
TSC# 15084-1611.10 |
Drosophila |
sechellia |
DS__Ba |
fruit fly |
169 |
140 |
18432 |
Seq
|
AGI |
7 |
TSC # 14021-0248.25 |
Drosophila |
simulans |
DS_ABa |
fruit fly |
145 |
152 |
18432 |
Seq
|
AGI |
7 |
TSC# 14021-0251.195, inbred from
simW501 |
Drosophila |
virilis |
DV_VBa |
fruit fly |
753 |
150 |
55296 |
Seq
|
AGI |
7 |
TSC # 15010-1051.87. (line V46, donated
by Bryant McAllister.) Plates 1-96 are 150kb inserts, plates
97-144 are 110kb inserts. Fly DNA digested with BstYI and
cloned into the BamHI site of vector. |
Drosophila |
willistoni |
DW__Ba |
fruit fly |
250.5 |
140 |
18432 |
Seq
|
AGI |
7 |
TSC# 14030-0811.24 |
Drosophila |
yakuba |
DY__Ba |
fruit fly |
164 |
150 |
11520 |
Seq
|
AGI |
7 |
TSC# 14021-0261.01 Filters will contain
plates 1-30 then be duplicate plates 1-18 to fill to 48
plates. | |
* 1 - None, 2 - HMW DNA
Prepared, 3 - Clones Picked, 4 - QC Sizing Done, 5 -
QC Seq Done, 6 - QC FP Done, 7 - Completed.
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Oryza BAC Library Project
Note: 1) Library names with hyperlinks, indicate
whole libraries (or individual clones) are available for public
distribution. 2) Please click on hyperlinked library name in
order to purchase this library from the Orders site.
Genus |
Species |
Genome Designation |
Library / Orders |
Common Name |
Genome Size (Mb) |
Avg Insert Size (Kb) |
No. of Clones |
Hyb. FingerPrinting(FP) &
Sequencing(Seq) QC |
Country of Origin |
Status* |
Comments |
Oryza |
australiensis |
EE |
OA_CBa
|
rice |
960 |
152 |
73728 |
Seq
|
Australia |
7 |
EE genome (OMAP); IRGC accession #
100882; This library does not contain contaminating clones of
other genomes. |
Oryza |
rufipogon |
AA |
OR_CBa
|
rice |
439 |
133 |
64512 |
Seq
| FP |
Malaysia |
7 |
AA genome (OMAP); Accession #IRGC 105491; perennial
type; source DNA from S. McCouch. The D filter will contain
plates 145-168 and plates 1-24 again to fill the filter at 48
plates. |
Oryza |
rufipogon |
AA |
OR__Ba |
rice |
450 |
134 |
92160 |
Seq
|
Vietnam |
7 |
AA genome, germplasm accession IRGC
#106424, perennial (other) type; source DNA from IRRI; |
Oryza |
sativa indica |
AA |
OSi9Ba |
rice |
450 |
143 |
36864 |
- |
- |
7 |
AA genome, germplasm accession
93-11. |
Oryza |
barthii |
AA |
OB_ABa
|
rice |
400 |
136 |
36864 |
- |
- |
7 |
AA genome, germplasm accession IRGC
#105608. |
Oryza |
glumaepatula |
AA |
OG_GBa
|
rice |
400 |
130 |
36864 |
- |
- |
7 |
AA genome, germplasm accession
GEN1233. |
Oryza |
longistaminata |
AA |
OL_ABa
|
rice |
400 |
126 |
36864 |
- |
- |
7 |
AA genome, germplasm accession IRGC
#110404. |
Oryza |
meridionalis |
AA |
OM_ABa
|
rice |
400 |
145 |
36864 |
- |
- |
7 |
AA genome, germplasm accession OR44
(W2112). |
Oryza |
nivara |
AA |
OR_BBa
|
rice |
448 |
161 |
55296 |
Seq
| FP |
India |
7 |
IRGC accession 100897. AA genome
(OMAP)annual type: W0106; source DNA from N. Kurata; May be
called O. nivara. |
Oryza |
glaberrima |
AA |
OG_BBa
|
rice |
354 |
130 |
55296 |
Seq
| FP |
Africa |
7 |
AA genome (OMAP), IRGC accession #
96717 (variety name CG14); source DNA from IRRI |
Oryza |
punctata |
BB |
OP__Ba
|
rice |
423 |
141 |
36864 |
Seq
| FP |
Africa |
7 |
BB genome (OMAP), IRGC accession #
105690; source DNA from IRRI; |
Oryza |
minuta |
BBCC |
OM__Ba
|
rice |
1124 |
124 |
129024 |
Seq
| FP |
Philippines |
7 |
BBCC genome (OMAP), IRGC accession #
101141; source DNA from IRRI; |
Oryza |
officinalis |
CC |
OO__Ba
|
rice |
653 |
140 |
92160 |
Seq
| FP |
Thailand |
7 |
CC genome (OMAP), IRGC accession #
100896; source DNA from IRRI; there are extra 12 plates |
Oryza |
alta |
CCDD |
OA_BBa
|
rice |
1000 |
132 |
92160 |
Seq
| FP |
S. America |
7 |
CCDD genome (OMAP); IRGC accession #
105143; source DNA from IRRI; |
Oryza |
australiensis |
EE |
OA_ABa
|
rice |
960 |
152 |
92160 |
Seq
| FP |
Australia |
7 |
EE genome (OMAP); IRGC accession #
100882; source DNA from N. Kurata. We have detected other
genome clones in this library.
|
Oryza |
brachyantha |
FF |
OB__Ba
|
rice |
338 |
130 |
36864 |
Seq
| FP |
Africa |
7 |
FF genome (OMAP), accession# 101232;
source DNA from IRRI; |
Oryza |
granulata |
GG |
OG_ABa
|
rice |
862 |
133 |
73728 |
Seq
| FP |
Thailand |
7 |
GG genome (OMAP), IRGC accession #
102118; source DNA from IRRI; |
Oryza |
ridleyi |
HHJJ |
OR_ABa
|
rice |
1283 |
126 |
129024 |
Seq
| FP |
Thailand |
7 |
HHJJ genome (OMAP), IRGC accession #
100821; source DNA from IRRI; |
Oryza |
coarctata |
HHKK |
OC__Ba
|
rice |
1283 |
122 |
147456 |
Seq
| FP |
Bangladesh |
7 |
HHKK genome (OMAP), IRGC accession #
104502; source DNA from IRRI; |
* 1 - None, 2 - HMW
DNA Prepared, 3 - Clones Picked, 4 - QC SizingDone,
5 - QC Seq Done, 6 - QC FP Done, 7 - Completed.
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Green Plant
BAC Library Project (visit www.greenbac.org for
more details)
Note: 1) Library names with hyperlinks, indicate
whole libraries (or individual clones) are available for public
distribution. 2) Please click on hyperlinked library name in
order to purchase this library from the Orders site.
Genus |
Species |
Library / Orders |
Common Name |
Genome Size (Mb) |
Avg Insert Size (Kb) |
No. of Clones |
Hyb. FingerPrinting(FP) &
Sequencing(Seq) QC |
Distributed by |
Status* |
Comments |
Green Algae |
Chara |
braunii |
CS__Ba |
alga, with sexual cells |
2193 |
- |
- |
- |
CUGI |
1 |
HindIII |
Caulerpa |
taxifolia |
CT__Ba |
alga, multinucleate |
- |
- |
- |
- |
CUGI |
1 |
HindIII |
Coleochaete |
orbicularis |
CO__Ba |
alga, multicellular |
94 |
- |
18432 |
- |
CUGI |
4 |
HindIII |
Coleochaete |
orbicularis |
CO__Bb |
alga, multicellular |
94 |
160 |
18432 |
- |
CUGI |
4 |
BstyI |
Coleochaete |
orbicularus |
CO__Sa |
alga, multicellular |
94 |
3 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Mesostigma |
viride |
MV__Bb |
alga, unicellular |
100 |
145 |
18432 |
Seq |
AGI |
4 |
HindIII |
Mesostigma |
viride |
MV__Sa |
alga, unicellular |
100 |
3 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Volvox |
carteri |
VCNEBa |
alga, colonial |
120 |
133 |
9216 |
Seq |
AGI |
4 |
HindIII |
Volvox |
carteri |
VCNEBb |
alga, colonial |
120 |
131 |
9216 |
Seq |
AGI |
4 |
BamHI |
Volvox |
carteri |
VCNESa |
alga, colonial |
120 |
2 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Non seed Land plants |
Angiopteris |
erecta |
AE__Ba |
tree(king)fern |
6464 |
- |
- |
- |
CUGI |
1 |
HindIII and BamHI |
Ceratopteris |
richardii |
CR__Ba |
Water Sprite - Fern |
11294 |
130 |
331776 |
- |
CUGI |
4 |
HindIII |
Marchantia |
polymorpha |
MP__Ba |
liverwort |
380 |
140 |
36864 |
- |
CUGI |
4 |
BstyI |
Marchantia |
polymorpha |
MP__Sa |
liverwort |
450 |
3 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Marselia |
minuta |
MM__Ba |
water clover |
1013 |
- |
- |
- |
CUGI |
1 |
HindIII and BamHI |
Selaginella |
moellendorfii |
SM__Ba |
shining club moss |
132 |
123 |
9216 |
Seq |
AGI |
7 |
HindIII |
Selaginella |
moellendorfii |
SM__Sa |
shining club moss |
132 |
2 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Seeds plants |
Acorus |
americanus |
AA__Ba |
sweet flag |
400 |
130 |
55296 |
Seq |
AGI |
7 |
HindIII |
Acorus |
americanus |
AA__Sa |
sweet flag |
400 |
2 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Amborella |
trichopoda |
AT_SBa |
amborella |
900 |
123 |
36864 |
Seq |
AGI |
7 |
HindIII |
Amborella |
trichopoda |
AT__Sa |
amborella |
900 |
2 |
1536 |
- |
AGI |
7 |
sheared genomic DNA |
Liriodendron |
tulipifera |
LT__Ba |
Tulip Poplar |
1800 |
113 |
73728 |
- |
CUGI |
7 |
HindIII |
Liriodendron |
tulipifera |
LT__Sa |
liriodendron |
1800 |
3 |
3072 |
- |
AGI |
7 |
sheared genomic DNA |
Mimulus |
guttatus |
MG__Ba |
Monkeyflower |
860 |
127 |
36864 |
- |
CUGI |
4 |
HindIII |
Nuphar |
advena |
NA__Ba |
waterlily |
3040 |
135 |
165888 |
Seq |
AGI |
7 |
HindIII |
* 1 - None, 2 - HMW
DNA Prepared, 3 - Clones Picked, 4 - QC Sizing Done,
5 - QC Seq Done, 6 - QC FP Done, 7 - Completed.
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|
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